84 Publications 2020 and 2021 • Osnat Cohen-Zontag, Rotem Gershon, Orit Harari-Steinberg, Itamar Kanter, Dorit Omer, Oren Pleniceanu, Gal Tam, Sarit Oriel, Herzl Ben-Hur, Guy Katz, Zohar Dotan, Tomer Kalisky, Benjamin Dekel, Naomi Pode-Shakked. “Author Correction: Human kidney clonal proliferation disclose lineage-restricted precursor characteristics”. Scientific Reports, 2021. • Itamar Kanter, Gur Yaari, Tomer Kalisky. “Applications of community detection algorithms to large biological datasets”. Deep Sequencing Data Analysis, 59-80, 2021. • Osnat Cohen-Zontag, Rotem Gershon, Orit Harari-Steinberg, Itamar Kanter, Dorit Omer, Oren Pleniceanu, Gal Tam, Sarit Oriel, Herzel Ben-Hur, Guy Katz, Zohar Dotan, Tomer Kalisky, Benjamin Dekel, Naomi Pode-Shakked. “Human kidney clonal proliferation disclose lineage-restricted precursor characteristics”. Scientific Reports, 2020. • Zabala M, Lobo NA, Antony J, Heitink LS, Gulati GS, Lam J, Parashurama N, Sanchez K, Adorno M, Sikandar SS, Kuo AH, Qian D, Kalisky T, Sim S, Li L, Dirbas FM, Somlo G, Newman A, Quake SR, Clarke MF. “LEFTY1 Is a Dual-SMAD Inhibitor that Promotes Mammary Progenitor Growth and Tumorigenesis”. Cell Stem Cell, 2020 Jul 14:S1934-5909(20)30284-8. • Yishay Wineberg*, Tali Hana Bar-Lev*, Anna Futorian*, Nissim Ben-Haim*, Leah Armon, Debby Ickowicz, Sarit Oriel, Efrat Bucris, Yishai Yehuda, Naomi PodeThroughput Applications using Scanning SQUID Microscopy”. Scientific Reports 10, Article number: 1573, 2020. • Yiftach Frenkel, Yanwu Xie, Harold Y. Hwang and Beena Kalisky. “Magnetism and conductivity along structural domain walls of SrTiO3”. J Supercond Nov Magn 33, pages195–197, 2020. Prof. Kalisky Tomer Faculty of Engineering Member of BINA Nano-Medicine Center Research Areas • Biochips & Sensors • Disease Treatment • Drug Delivery • Genomics, Proteomics & Glycomics • Imaging Abstract Single-cell genomics The mission of our lab is to understand how tissues and organs are formed in the human body, how they are maintained and regenerated throughout our lifetime, and what causes them to behave badly and create cancer. Two specific aims are: (i) to find markers for tissue-specific and cancer stem cells for regenerative medicine, targeted therapeutics, and early detection, and (ii) to understand tumor heterogeneity, that is, how tumors differ from patient to patient, in order to design personalized treatment strategies. To this end, we use single-cell technologies and next-generation sequencing. We dissociate a tissue or tumor into single cells and measure gene expression and sequence information from each individual cell. Then, we use computational algorithms to identify and characterize the different cells types and to understand their roles, fate trajectories, and network of interactions. Comprehensive profiling of embryonic, adult, and diseased tissues at the single-cell level will allow us to understand cellular and molecular mechanism underlying development, regeneration, and disease. Prof. Kaminka Gal Department of Computer Science Member of BINA Nano-Medicine Center & Nano-Robotics Center Research Areas • Teams of Robots • Agents and People • Data Mining and Learning • Multi-Agent Systems • Artificial intelligence (AI) Abstract Artificial intelligence and multi-robot systems Computational mechanisms that underly intelligent social behavior, artificial and natural. Such mechanisms include the ability to understand what others are doing and intend to do, and to generate appropriate cooperative, coordinated behavior. This research emphasizes both theory and experiments with robots to synthesize social intelligence in the lab, and in real-world applications including applications in molecular nano-scale robots Publications 2020 and 2021 • Gal A Kaminka, Alon T Zanbar. “Intelligent Agents are More Complex: Initial Empirical Findings”. Artificial Intelligence Methods for Software Engineering, 87108, 2021. • Mika Barkan. “Predictive Execution Monitoring for Layered Hierarchical Recipes”. Master’s Thesis, Bar Ilan University, 2020. Shakked, Shlomit Gilad, Sima Benjamin, Peter Hohenstein, Benjamin Dekel**, Achia Urbach**, and Tomer Kalisky**. “Single cell RNA sequencing reveals splice isoform switching events in the developing mouse kidney”. J Am Soc Nephrol. 2020 Jul 10: ASN.2019080770. • Harari-Steinberg O, Omer D, Gnatek Y, Pleniceanu O, Goldberg S, Cohen-Zontag O, Pri-Chen S, Kanter I, Ben Haim N, Becker E, Fuchs Y, Kalisky T, Dotan Z, Dekel B. “Ex vivo expanded 3D human kidney spheres engraft long term and repair chronic renal injury in mice”. Cell Rep, 2020 Jan 21;30(3):852-869.e4.
RkJQdWJsaXNoZXIy NDU2MA==